Transactions on Computational Systems Biology VIThe 5th Transactions on Computational Systems Biology volume, edited by Gordon Plotkin, features carefully selected and enhanced contributions initially presented at the 2005 IEEE International Conference on Granular Computing. The 9 papers selected for this special issue discuss various aspects of computational methods, algorithm and techniques in bioinformatics such as gene expression analysis, biomedical literature mining and natural language processing, protein structure prediction, biological database management and biomedical information retrieval. |
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Inhalt
Driven Statistics of Biological Networks | 1 |
omputational Power of Brane Calculi | 16 |
of Signalling Pathways Using Continuous Time Markov | 44 |
Learning Biochemical Networks from Temporal Logic | 68 |
ve Petri Net Modelling of Genetic Networks | 95 |
Lg Bacterial Transcription and Translation in a Stochastic 7r | 113 |
3d Abstraction Methodology for Genetic Regulatory | 150 |
is a New Computational Modelling Tool for Systems | 176 |
ice of Metabolite Fragments and Flow Analysis of Isotopomer | 198 |
antanen Hannu Maaheimo Esa Pitkdnen Juho Rousu | 219 |
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abstraction activation algorithm analysis applied approach arcs associated bacteria behavior biochemical biological called carbon cell checking complex Computer concentration connected consider contains corresponding defined definition described deterministic distribution dominator dynamics encoding equations equivalence example exists expression finite flow flux formal formulae fragment function genetic given graph initial interaction isotopomer Journal labelling language logical mapping measurements membrane metabolic metabolites method molecular molecules multisets Nature nets networks nodes normal form Notes objects observable obtained occurrence operator pairs parameter path pathway performed Petri possible present preserve produced properties protein reaction reduction regulatory relation representation representing rewrite rule satisfied Science semantics shuffle signal simulation specification step stochastic structure termination transcription transition translation true universal values