Systems Biology and Biotechnology of Escherichia coliSystems biology is changing the way biological systems are studied by allowing us to examine the cell and organism as a whole. Systems biotechnology allows optimal design and development of upstream to downstream bioprocesses by taking a systems-approach. E. coli has been a model organism for almost all biological and biotechnological studies. This book brings together for the first time the state-of-the-art reviews by the world-leading experts on systems biology and biotechnological applications of E. coli. The topics covered include genomics and functional genomics, resources for systems biology, network analysis, genome-scale metabolic reconstruction, modelling and simulation, dynamic modelling and simulation, systems-level analysis of evolution, plasmids and expression systems, protein synthesis, production and export, engineering the central metabolism, synthetic biology, and systems metabolic engineering of E. coli. This book provides readers with guidance on how a complex biological system can be studied using E. coli as a model organism. It also presents how to perform synthetic biology and systems metabolic engineering studies on E. coli with successful examples, the approaches of which can be extended to other organisms. This book will be a complete resource for anyone interested in systems biology and biotechnology. |
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Inhalt
1 | |
Performance Characteristics for Sensors and Circuits | 19 |
MultiOmics DataDriven Systems Biology of E coli | 41 |
A MediumThroughput Structural Proteomics Approach Applied | 58 |
Resources for Escherichia coli Systems Biology | 87 |
The Multiple Scientific Disciplines Served by EcoCyc | 99 |
Analysis of E coli Network | 113 |
Sensory Transduction Network of E coli | 133 |
GenomeScale Models and the Genetic Basis for E coli Adaptation | 237 |
Organisation of Complex Escherichia coli Promoters | 257 |
Plasmid Regulation and SystemsLevel Effects on Escherichia coli | 273 |
SystemsLevel Analysis of Protein Quality in Inclusion | 295 |
Mechanistic Challenges and Engineering Applications of Protein | 327 |
Engineering E coli Central Metabolism for Enhanced Primary | 351 |
Glucose and Acetate Metabolism in E coli System Level Analysis | 377 |
Systems Metabolic Engineering of E coli | 441 |
Integration of in vitro | 177 |
Dynamic Modeling of the Central Metabolism of E coli Linking | 209 |
455 | |