Computational Methods in Systems Biology: International Conference CMSB 2007, Edinburgh, Scotland, September 20-21, 2007, ProceedingsMuffy Calder, Stephen Gilmore Springer, 04.09.2007 - 249 Seiten This book constitutes the refereed proceedings of the International Conference on Computational Methods in Systems Biology, CMSB 2007, held in Edinburgh, Scotland, September 2007. The 16 revised full papers presented present a variety of techniques from computer science, such as language design, concurrency theory, software engineering, and formal methods, for biologists, physicists, and mathematicians interested in the systems-level understanding of cellular processes. |
Inhalt
1 | |
Simultaneous Stochastic Simulation of Multiple Perturbations in Biological Network Models | 15 |
Modelling Yeast Prer_RNA Processing | 32 |
On the Analysis of Numerical Data Time Series in Temporal Logic | 48 |
Context Sensitivity in Logical Modeling with Time Delays | 64 |
Stochastic Simulation of Biological Systems with Dynamical Compartment Structure | 80 |
Computational Simulation of Optical Tracking of Cell Populations Using Quantum Dot Fluorophores | 96 |
A Formal and Integrated Framework to Simulate Evolution of Biological Pathways | 106 |
An Automated Translation from a Narrative Language for Biological Modelling into Process Algebra | 136 |
Expressive Models for Synaptic Plasticity | 152 |
Modelization and Simulation of Nano Devices in nanoκ Calculus | 168 |
Efficient Correct Simulation of Biological Processes in the Stochastic Picalculus | 184 |
A Unifying Framework for Modelling and Analysing Biochemical Pathways Using Petri Nets | 200 |
Reconstructing Metabolic Pathways by Bidirectional Chemical Search | 217 |
Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks | 233 |
248 | |
Reconstruction of Mammalian Cell Cycle Regulatory Network from Microarray Data Using Stochastic Logical Networks | 121 |
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Computational Methods in Systems Biology: International Conference CMSB 2007 ... Muffy Calder,Stephen Gilmore Eingeschränkte Leseprobe - 2007 |
Häufige Begriffe und Wortgruppen
action active algorithm allows analysis applied approach associated behaviour binder biochemical biological bound calculus cell channel chemical circuit compartment complex component computational concentration considered context continuous corresponding cycle defined Definition delay denotes depends derived described determine direct discrete distribution domain dynamics edges elements equation example experimental experiments expression expression level Figure formal function gene give given graph hence Importance increase influence initial interaction involved labelling language logical means measure metabolic pathways method molecular molecules networks obtained occur parameter particular pathway perform Petri population possible present probability properties protein reaction reconstruction reference regulatory relation release represent representation respectively Sampling signal silico simulation species step stochastic structure switch term tion trace transcription transition values variables vescicles volume
Beliebte Passagen
Seite 231 - Palsson. 2000. The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities. Proc. Natl. Acad. Sci. USA 97:55285533.