Systems Biology and Computational Proteomics: Joint RECOMB 2006 Satellite Workshops on Systems Biology, and on Computational Proteomics, San Diego, CA, USA, December 1-3, 2006, Revised Selected Papers

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Trey Ideker, Vineet Bafna
Springer Science & Business Media, 20.07.2007 - 134 Seiten
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This book constitutes the thoroughly refereed post-proceedings of two joint RECOMB 2006 satellite events: the Second Annual Workshop on Systems Biology, RSB 2006, and the First Biennial Workshop on Computational Proteomics, RCP 2006, held in San Diego, CA, USA in December 2006. The papers cover various aspects of systems biology and explore the use of computational mass spectrometry in various proteomic applications.

 

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Inhalt

The Role of the Seed Graph in PPI Network Emulation
1
Probabilistic Paths for Protein Complex Inference
14
Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting
29
A ContextSpecific Network of ProteinDNA and ProteinProtein Interactions Reveals New Regulatory Motifs in Human B Cells
42
Identification and Evaluation of Functional Modules in Gene Coexpression Networks
57
A Linear Discrete Dynamic System Model for Temporal Gene Interaction and Regulatory Network Influence in Response to Bioethanol Conversion I...
77
A Computational Approach for the Identification of SiteSpecific Protein Glycosylations Through IonTrap Mass Spectrometry
96
De Novo Signaling Pathway Predictions Based on ProteinProtein Interaction Targeted Therapy and Protein Microarray Analysis
108
Alignment of Mass Spectrometry Data by Clique Finding and Optimization
119
Author Index
130
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